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| 13.10.2012 | 10:15 | FK Ústí nad Labem | - | MFK Karviná | 3:2 (1:1) | |
| 10:15 | Bohemians Praha | - | FK Baník Sokolov | 1:1 (1:1) | ||
| 15:30 | FK Baník Most | - | 1. HFK Olomouc | 0:2 (0:2) | ||
| 16:00 | FC Graffin Vlašim | - | SFC Opava | 2:0 (0:0) | ||
| 16:00 | FK MAS Táborsko | - | Bohemians 1905 | 1:1 (1:0) | ||
| 14.10.2012 | 10:15 | Viktoria Žižkov | - | FC Fastav Zlín | 1:2 (1:0) | |
| 16:00 | FK Varnsdorf | - | 1. SC Znojmo | 0:1 (0:0) | ||
| 16:00 | FK Čáslav | - | FK Pardubice | 0:1 (0:1) |
| » Classement | équipe recevante | à l'extérieur | Premier tour | Second tour |
| # | Équipe | M. | G. | N. | P. | Buts | Diff. | Pts. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
1. SC Znojmo | 11 | 8 | 2 | 1 | 16:6 | 10 | 26 |
| 2 |
|
Viktoria Žižkov | 11 | 7 | 1 | 3 | 16:8 | 8 | 22 |
| 3 |
|
Bohemians 1905 | 11 | 6 | 3 | 2 | 19:9 | 10 | 21 |
| 4 |
|
1. HFK Olomouc | 11 | 6 | 2 | 3 | 20:15 | 5 | 20 |
| 5 |
|
FK Baník Sokolov | 11 | 5 | 4 | 2 | 16:9 | 7 | 19 |
| 6 |
|
FK Pardubice | 11 | 4 | 3 | 4 | 17:12 | 5 | 15 |
| 7 |
|
FC Graffin Vlašim | 11 | 4 | 3 | 4 | 14:17 | -3 | 15 |
| 8 |
|
FK Varnsdorf | 11 | 4 | 2 | 5 | 16:13 | 3 | 14 |
| 9 |
|
FK Ústí nad Labem | 11 | 4 | 2 | 5 | 13:17 | -4 | 14 |
| 10 |
|
FC Fastav Zlín | 11 | 4 | 2 | 5 | 12:16 | -4 | 14 |
| 11 |
|
FK MAS Táborsko | 11 | 2 | 6 | 3 | 10:9 | 1 | 12 |
| 12 |
|
MFK Karviná | 11 | 3 | 3 | 5 | 11:18 | -7 | 12 |
| 13 |
|
Bohemians Praha | 11 | 1 | 8 | 2 | 8:9 | -1 | 11 |
| 14 |
|
FK Baník Most | 11 | 2 | 4 | 5 | 11:19 | -8 | 10 |
| 15 |
|
SFC Opava | 11 | 1 | 4 | 6 | 12:25 | -13 | 7 |
| 16 |
|
FK Čáslav | 11 | 1 | 3 | 7 | 6:15 | -9 | 6 |
| Promotion | |
| Relégation |
