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| Classement | » Premier tour | Second tour |
| # | Équipe | M. | G. | N. | P. | Buts | Diff. | Pts. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Gamba Osaka | 21 | 13 | 7 | 1 | 40:16 | 24 | 46 |
| 2 |
|
Vissel Kobe | 21 | 13 | 5 | 3 | 38:21 | 17 | 44 |
| 3 |
|
V-Varen Nagasaki | 21 | 10 | 6 | 5 | 24:20 | 4 | 36 |
| 4 |
|
Kyoto Sanga FC | 21 | 10 | 5 | 6 | 36:23 | 13 | 35 |
| 5 |
|
JEF United Chiba | 21 | 9 | 8 | 4 | 33:22 | 11 | 35 |
| 6 |
|
Tochigi SC | 21 | 9 | 7 | 5 | 29:22 | 7 | 34 |
| 7 |
|
Montedio Yamagata | 21 | 10 | 3 | 8 | 42:28 | 14 | 33 |
| 8 |
|
Avispa Fukuoka | 21 | 8 | 7 | 6 | 21:19 | 2 | 31 |
| 9 |
|
Fagiano Okayama | 21 | 6 | 12 | 3 | 24:19 | 5 | 30 |
| 10 |
|
Consadole Sapporo | 21 | 9 | 2 | 10 | 24:23 | 1 | 29 |
| 11 |
|
Tokyo Verdy | 21 | 6 | 10 | 5 | 25:20 | 5 | 28 |
| 12 |
|
Mito HollyHock | 21 | 7 | 6 | 8 | 23:25 | -2 | 27 |
| 13 |
|
Yokohama FC | 21 | 6 | 8 | 7 | 20:23 | -3 | 26 |
| 14 |
|
Matsumoto Yamaga | 21 | 7 | 5 | 9 | 19:22 | -3 | 26 |
| 15 |
|
Tokushima Vortis | 21 | 8 | 2 | 11 | 26:33 | -7 | 26 |
| 16 |
|
Ehime FC | 21 | 7 | 3 | 11 | 22:28 | -6 | 24 |
| 17 |
|
Kataller Toyama | 21 | 5 | 6 | 10 | 18:29 | -11 | 21 |
| 18 |
|
Roasso Kumamoto | 21 | 5 | 6 | 10 | 25:38 | -13 | 21 |
| 19 |
|
Giravanz Kitakyushu | 21 | 5 | 5 | 11 | 25:32 | -7 | 20 |
| 20 |
|
Thespakusatsu Gunma | 21 | 4 | 7 | 10 | 18:31 | -13 | 19 |
| 21 |
|
Gainare Tottori | 21 | 4 | 7 | 10 | 18:34 | -16 | 19 |
| 22 |
|
FC Gifu | 21 | 4 | 5 | 12 | 16:38 | -22 | 17 |
| Promotion | |
| Play-off | |
| Relégation |
