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| Classement | Premier tour | » Second tour |
| # | Équipe | M. | G. | N. | P. | Buts | Diff. | Pts. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Avispa Fukuoka | 21 | 15 | 4 | 2 | 39:14 | 25 | 49 |
| 2 |
|
Júbilo Iwata | 21 | 12 | 6 | 3 | 38:21 | 17 | 42 |
| 3 |
|
Omiya Ardija | 21 | 12 | 4 | 5 | 39:26 | 13 | 40 |
| 4 |
|
Ehime FC | 21 | 10 | 5 | 6 | 24:15 | 9 | 35 |
| 5 |
|
Roasso Kumamoto | 21 | 9 | 7 | 5 | 26:16 | 10 | 34 |
| 6 |
|
Tokushima Vortis | 21 | 10 | 4 | 7 | 18:19 | -1 | 34 |
| 7 |
|
Cerezo Osaka | 21 | 9 | 6 | 6 | 25:21 | 4 | 33 |
| 8 |
|
Giravanz Kitakyushu | 21 | 9 | 3 | 9 | 32:28 | 4 | 30 |
| 9 |
|
V-Varen Nagasaki | 21 | 7 | 9 | 5 | 19:16 | 3 | 30 |
| 10 |
|
Kyoto Sanga FC | 21 | 6 | 10 | 5 | 20:18 | 2 | 28 |
| 11 |
|
Tokyo Verdy | 21 | 8 | 3 | 10 | 20:20 | 0 | 27 |
| 12 |
|
Mito HollyHock | 21 | 5 | 11 | 5 | 23:23 | 0 | 26 |
| 13 |
|
Kamatamare Sanuki | 21 | 6 | 8 | 7 | 16:16 | 0 | 26 |
| 14 |
|
Fagiano Okayama | 21 | 5 | 10 | 6 | 18:19 | -1 | 25 |
| 15 |
|
FC Gifu | 21 | 7 | 3 | 11 | 14:29 | -15 | 24 |
| 16 |
|
Oita Trinita | 21 | 6 | 5 | 10 | 23:24 | -1 | 23 |
| 17 |
|
Consadole Sapporo | 21 | 6 | 5 | 10 | 23:27 | -4 | 23 |
| 18 |
|
Thespakusatsu Gunma | 21 | 6 | 5 | 10 | 15:27 | -12 | 23 |
| 19 |
|
JEF United Chiba | 21 | 5 | 6 | 10 | 19:25 | -6 | 21 |
| 20 |
|
Yokohama FC | 21 | 5 | 6 | 10 | 11:31 | -20 | 21 |
| 21 |
|
Zweigen Kanazawa | 21 | 2 | 11 | 8 | 18:27 | -9 | 17 |
| 22 |
|
Tochigi SC | 21 | 2 | 7 | 12 | 17:35 | -18 | 13 |
| Promotion | |
| Play-off | |
| Relégation | |
| Relégation |
