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| Classement | équipe recevante | » à l'extérieur | Premier tour | Second tour |
| # | Équipe | M. | G. | N. | P. | Buts | Diff. | Pts. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Shonan Bellmare | 20 | 14 | 4 | 2 | 41:12 | 29 | 46 |
| 2 |
|
Matsumoto Yamaga | 20 | 12 | 6 | 2 | 33:12 | 21 | 42 |
| 3 |
|
Júbilo Iwata | 20 | 8 | 6 | 6 | 28:27 | 1 | 30 |
| 4 |
|
Fagiano Okayama | 20 | 8 | 5 | 7 | 25:24 | 1 | 29 |
| 5 |
|
Montedio Yamagata | 20 | 7 | 7 | 6 | 22:20 | 2 | 28 |
| 6 |
|
Giravanz Kitakyushu | 19 | 7 | 7 | 5 | 20:18 | 2 | 28 |
| 7 |
|
Kyoto Sanga FC | 20 | 8 | 4 | 8 | 28:29 | -1 | 28 |
| 8 |
|
V-Varen Nagasaki | 20 | 7 | 6 | 7 | 30:23 | 7 | 27 |
| 9 |
|
Mito HollyHock | 20 | 7 | 6 | 7 | 20:20 | 0 | 27 |
| 10 |
|
Yokohama FC | 20 | 6 | 7 | 7 | 23:23 | 0 | 25 |
| 11 |
|
Avispa Fukuoka | 21 | 6 | 7 | 8 | 29:33 | -4 | 25 |
| 12 |
|
Roasso Kumamoto | 19 | 6 | 7 | 6 | 19:24 | -5 | 25 |
| 13 |
|
JEF United Chiba | 20 | 5 | 9 | 6 | 25:24 | 1 | 24 |
| 14 |
|
Consadole Sapporo | 20 | 6 | 5 | 9 | 17:24 | -7 | 23 |
| 15 |
|
Tochigi SC | 20 | 6 | 4 | 10 | 20:31 | -11 | 22 |
| 16 |
|
Ehime FC | 20 | 4 | 8 | 8 | 23:29 | -6 | 20 |
| 17 |
|
Tokyo Verdy | 20 | 4 | 7 | 9 | 16:21 | -5 | 19 |
| 18 |
|
FC Gifu | 20 | 5 | 4 | 11 | 18:26 | -8 | 19 |
| 19 |
|
Thespakusatsu Gunma | 20 | 6 | 1 | 13 | 17:27 | -10 | 19 |
| 20 |
|
Oita Trinita | 20 | 3 | 10 | 7 | 20:32 | -12 | 19 |
| 21 |
|
Kamatamare Sanuki | 21 | 3 | 7 | 11 | 20:40 | -20 | 16 |
| 22 |
|
Kataller Toyama | 20 | 2 | 3 | 15 | 14:39 | -25 | 9 |
| Promotion | |
| Play-off | |
| Relégation | |
| Relégation |
