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| Classement | » équipe recevante | à l'extérieur | Premier tour | Second tour |
| # | Équipe | M. | G. | N. | P. | Buts | Diff. | Pts. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Shonan Bellmare | 20 | 15 | 4 | 1 | 38:10 | 28 | 49 |
| 2 |
|
Oita Trinita | 20 | 13 | 2 | 5 | 29:20 | 9 | 41 |
| 3 |
|
Matsumoto Yamaga | 20 | 11 | 5 | 4 | 28:20 | 8 | 38 |
| 4 |
|
JEF United Chiba | 20 | 11 | 5 | 4 | 27:19 | 8 | 38 |
| 5 |
|
Giravanz Kitakyushu | 21 | 11 | 4 | 6 | 29:29 | 0 | 37 |
| 6 |
|
Júbilo Iwata | 20 | 10 | 6 | 4 | 38:25 | 13 | 36 |
| 7 |
|
Consadole Sapporo | 20 | 9 | 7 | 4 | 28:17 | 11 | 34 |
| 8 |
|
Montedio Yamagata | 20 | 10 | 3 | 7 | 32:22 | 10 | 33 |
| 9 |
|
Kyoto Sanga FC | 20 | 5 | 13 | 2 | 28:23 | 5 | 28 |
| 10 |
|
Fagiano Okayama | 20 | 6 | 10 | 4 | 23:23 | 0 | 28 |
| 11 |
|
Yokohama FC | 20 | 7 | 6 | 7 | 24:20 | 4 | 27 |
| 12 |
|
Tochigi SC | 20 | 7 | 6 | 7 | 29:26 | 3 | 27 |
| 13 |
|
Thespakusatsu Gunma | 20 | 7 | 5 | 8 | 24:24 | 0 | 26 |
| 14 |
|
FC Gifu | 20 | 7 | 5 | 8 | 33:34 | -1 | 26 |
| 15 |
|
Ehime FC | 20 | 7 | 4 | 9 | 27:25 | 2 | 25 |
| 16 |
|
V-Varen Nagasaki | 20 | 5 | 10 | 5 | 15:17 | -2 | 25 |
| 17 |
|
Roasso Kumamoto | 21 | 6 | 7 | 8 | 22:27 | -5 | 25 |
| 18 |
|
Avispa Fukuoka | 19 | 7 | 3 | 9 | 20:22 | -2 | 24 |
| 19 |
|
Mito HollyHock | 20 | 5 | 8 | 7 | 25:21 | 4 | 23 |
| 20 |
|
Tokyo Verdy | 20 | 4 | 7 | 9 | 12:25 | -13 | 19 |
| 21 |
|
Kamatamare Sanuki | 19 | 4 | 5 | 10 | 14:29 | -15 | 17 |
| 22 |
|
Kataller Toyama | 20 | 3 | 5 | 12 | 13:30 | -17 | 14 |
| Promotion | |
| Play-off | |
| Relégation | |
| Relégation |
